Helping Scrub Typhus Off the Disease List Through Genome Wide Association Studies
Update 09.11.2022
Researchers provide genetic information on disease biomarkers to accelerate the development of therapeutics for a new strain of scrub typhus
Recent studies have reported the concerning development of a new, drug-resistant strain of scrub typhus, a fatal zoonotic disease spread by mite bites. Now, researchers from Korea have used genome-wide association studies to identify genetic biomarkers behind the disease’s progression. Their study revealed variations located on genes associated with susceptibility to this disease, as well as affected cell signaling pathways. These findings can be used to develop effective treatment measures against scrub typhus.
If
left untreated, scrub typhus, which is spread by mite bites, has been reported
to be fatal in 4–40% of cases. Researchers
from Korea used genome-wide association studies to determine genetic biomarkers
behind the progression of scrub typhus. Their findings can be used to develop
effective treatment measures against this fatal zoonotic disease.
Photo
Courtesy: Shutterstock
Zoonotic diseases—infectious diseases that
spread from animals to humans—are a rapidly growing public health concern.
COVID-19 is arguably today’s most familiar example of a possible zoonotic
disease. However, it is imperative that other emerging zoonotic diseases are
also kept in check to prevent them from ever reaching pandemic proportions. Scrub typhus is one such
fatal zoonotic disease spread by mites and caused by the bacteria Orientia
tsutsugamushi.
Since its discovery in the 1930s in Japan, scrub
typhus has been steadily expanding due to global warming and globalization.
When left untreated, the mortality of the disease reaches a median of 6%, but
antibiotics such as doxycycline or azithromycin can bring this number down to
1.4%. However, recent studies have reported concerning findings about a new,
antibiotic-resistant strain of this disease in Thailand. In light of this issue,
novel antibiotics or therapeutics that can effectively treat scrub typhus are
the need of the hour.
In a
collaborative study published in the journal Cells, researchers from
Jeonbuk National University and other institutes in Korea aimed to understand
the molecular mechanisms behind the propagation of scrub typhus. Their study is
based on findings from genome-wide association studies (GWAS), which are used identify
genes that contribute to a disease. “GWAS is a high-throughput and
convenient genetic method that can reveal the molecular mechanisms of a disease
based on genome-wide comparisons between a diseased group and a healthy control
group,” explains Professor Byung-Hoon Jeong. More specifically, these
genetic comparisons allow researchers to identify consistent genetic variations
(or ‘biomarkers’) between both groups. In turn, this provides leads to
potential therapeutic targets, which are ultimately used to develop new drugs. This study was
supported by a Korea Centers for Disease Control and Prevention (KCDC) grant
(No. 2013-E71005-00, 2014-E71003-00).
The researchers initially obtained blood samples
from 148 individuals, half of whom had scrub typhus at an early stage while the
other half consisted of healthy individuals. The GWAS revealed eight genetic
variations (called “single nucleotide polymorphisms”) on a group of genes related
to susceptibility to the disease. Because the initial identification of these
candidate genes did not explain much about the molecular mechanisms of scrub
typhus, the researchers investigated which other genes interacted the most with
them, as well as the cell signaling pathways they were involved in.
Using MIST (Molecular Interaction Search Tool)—a
database of protein and gene interactions—the researchers identified 224 genes that
interacted with the candidate genes of scrub typhus. These genes were then
classified based on their cell signaling pathways using PANTHER, which is a
web-based platform for analyzing gene function. Their analysis revealed a total
of 62 signal pathways. Fifteen of these pathways that multiple candidate genes
were involved in were responsible for vital cell functions, such as
angiogenesis (the formation of new blood vessels) and apoptosis (programmed cell
death). However, the signaling pathway with the most associated genes (31
genes) was the gonadotropin-releasing hormone pathway, which is responsible for
producing the hormones testosterone in men and estrogen and progesterone in
women.
This study constitutes a necessary first step in
the development of effective treatment options for scrub typhus. “Our
efforts will hopefully improve the understanding of the pathological mechanisms
of scrub typhus. If an effective biomarker is verified based on our results, it
may be possible to develop a much-needed therapeutic agent for this disease,”
concludes Prof. Jeong. Furthermore, the study paves the way for further
investigation into the relationship between susceptibility to scrub typhus and
the gonadotropin-releasing hormone pathway.
Overall, this study’s findings certainly cement the
importance of GWAS in breaking the chain of zoonotic diseases.
Reference
Authors Yong-Chan Kim 1,2, Soriul Kim 3, Hee-Kwon Kim 4, Yi Lee 5 , Chol Shin 3,6, Chang-Seop Lee 7,8,* and Byung-Hoon Jeong 1,2,*
Title of original paper Genome-Wide Association Study Identifies Eight Novel Loci for Susceptibility of Scrub Typhus and Highlights Immune-Related
Signaling Pathways in Its Pathogenesis
Journal Cells
DOI 10.3390/cells10030570
Affiliations 1. Korea Zoonosis Research Institute, Jeonbuk National
University, Korea
2. Department of Bioactive Material Sciences, Jeonbuk National University, Korea
3. Korea University, Korea
4. Jeonbuk National University Medical School and Hospital, Korea
5. Chungbuk National University, Korea
6. Korea University Ansan Hospital, Korea
7. Jeonbuk National University Medical School, Korea
8. Jeonbuk National University Hospital, Korea
About National Institute of Health in Korea
The Korea National Institute of Health (KNIH),
one of the major operating components of the Ministry of Health and Welfare,
leads the nation’s medical research. Over the past seven decades, the KNIH has
made unwavering efforts to enhance the public’s health and innovate biomedical
research. The KNIH seeks to eradicate diseases and make people healthier. The
KNIH establishes a scientific basis and evidence underlying health policy as
well as provides national research infrastructures. We also promote public
health research. To this end, we make efforts to enrich a health research
environment by granting funds to research projects and keeping our resources,
data, and facilities more open and accessible to researchers.
Website: http://www.nih.go.kr/eng/
About Professor Byung-Hoon Jeong
Byung-Hoon Jeong is currently an Associate Professor at the Bioactive
Material Sciences and Korea Zoonosis Research Institute, Jeonbuk National
University. He obtained a Ph.D. degree from Kangwon National University in
2002. He has served as a Section Chief at the Ilsong Institute of Life Science,
Hallym University, as well as a Member of the Editorial Board of the International
Journal of Genomics. He is also the author or coauthor of more than 90
peer-reviewed research papers. His main research interests are in the
diagnosis, genetic susceptibility makers, and pathogenic molecular mechanism of
infectious diseases, including prion diseases.